A: No it would not by default. By default we override the selection of color themes the user makes in Office. We do this because there are a lot of built in color themes within Office, and your company charts can very quickly become off brand.
Q: Can my CorporateCharts templates change color when i change the Office color theme?
A: Sure, just let us know, but be aware of the consequences, and keep in mind that a regular color theme only have 6 colors (accents). Do your corporate color scheme have more? Consider overriding the color theme selection for your users.